Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gm18041-201ENSMUST00000218210 618 ntBASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gm9139-201ENSMUST00000218817 700 ntBASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col25a1Q99MQ5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm13296-201ENSMUST00000117854 997 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm12036-201ENSMUST00000120008 530 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm12502-201ENSMUST00000120197 444 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm11450-201ENSMUST00000121144 333 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm17208-201ENSMUST00000168388 535 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm22877-201ENSMUST00000175451 105 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm25201-201ENSMUST00000083093 170 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col25a1Q99MQ5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col25a1Q99MQ5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms