Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdk9Q99J95 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdk9Q99J95 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13□□□□□ -0.33
Cdk9Q99J95 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cdk9Q99J95 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdk9Q99J95 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdk9Q99J95 Gm14057-201ENSMUST00000120631 482 ntBASIC13□□□□□ -0.33
Cdk9Q99J95 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13□□□□□ -0.33
Cdk9Q99J95 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Gm27772-201ENSMUST00000184900 187 ntBASIC13□□□□□ -0.33
Cdk9Q99J95 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13□□□□□ -0.33
Cdk9Q99J95 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13□□□□□ -0.33
Cdk9Q99J95 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13□□□□□ -0.33
Cdk9Q99J95 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13□□□□□ -0.33
Cdk9Q99J95 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13□□□□□ -0.33
Cdk9Q99J95 Gm45053-201ENSMUST00000206112 2499 ntBASIC13□□□□□ -0.33
Cdk9Q99J95 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk9Q99J95 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm14767-201ENSMUST00000121559 586 ntBASIC12.99□□□□□ -0.33
Cdk9Q99J95 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm27306-201ENSMUST00000183970 107 ntBASIC12.99□□□□□ -0.33
Cdk9Q99J95 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm17330-201ENSMUST00000221047 165 ntBASIC12.99□□□□□ -0.33
Cdk9Q99J95 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Cdk9Q99J95 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms