Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha3Q91Y16 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm12384-201ENSMUST00000119228 919 ntBASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm2231-201ENSMUST00000125661 612 ntBASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Snora78-201ENSMUST00000158630 128 ntBASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm27731-201ENSMUST00000185192 107 ntBASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.5□□□□□ -0.25
Pcdha3Q91Y16 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Paupar-201ENSMUST00000194826 3482 ntBASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha3Q91Y16 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms