Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb5Q91XZ5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gm13665-201ENSMUST00000120830 528 ntBASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gm27341-201ENSMUST00000183570 106 ntBASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb5Q91XZ5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Gm11439-201ENSMUST00000118598 409 ntBASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Gm16296-201ENSMUST00000159905 325 ntBASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb5Q91XZ5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb5Q91XZ5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.14■□□□□ 0.01
Pcdhb5Q91XZ5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb5Q91XZ5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb5Q91XZ5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb5Q91XZ5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb5Q91XZ5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms