Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhga11Q91XY8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Gm5687-201ENSMUST00000118252 640 ntBASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Gm12138-201ENSMUST00000122180 951 ntBASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhga11Q91XY8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhga11Q91XY8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhga11Q91XY8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms