Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trex1Q91XB0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.73□□□□□ -0.05
Trex1Q91XB0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.73□□□□□ -0.05
Trex1Q91XB0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trex1Q91XB0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Gm14028-201ENSMUST00000117434 479 ntBASIC14.72□□□□□ -0.05
Trex1Q91XB0 Gm25700-201ENSMUST00000177693 110 ntBASIC14.72□□□□□ -0.05
Trex1Q91XB0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.72□□□□□ -0.05
Trex1Q91XB0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trex1Q91XB0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms