Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.76□□□□□ -0.21
TraipQ8VIG6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Gm30285-201ENSMUST00000214614 422 ntBASIC13.76□□□□□ -0.21
TraipQ8VIG6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TraipQ8VIG6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.75□□□□□ -0.21
TraipQ8VIG6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.75□□□□□ -0.21
TraipQ8VIG6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm13736-201ENSMUST00000119272 253 ntBASIC13.75□□□□□ -0.21
TraipQ8VIG6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm8018-201ENSMUST00000173536 789 ntBASIC13.75□□□□□ -0.21
TraipQ8VIG6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm2546-201ENSMUST00000182630 991 ntBASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gm22058-201ENSMUST00000083393 310 ntBASIC13.75□□□□□ -0.21
TraipQ8VIG6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TraipQ8VIG6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.74□□□□□ -0.21
TraipQ8VIG6 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.74□□□□□ -0.21
TraipQ8VIG6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TraipQ8VIG6 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms