Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm14701-201ENSMUST00000117156 348 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm8410-201ENSMUST00000117225 605 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm18905-201ENSMUST00000205454 928 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm5779-201ENSMUST00000218467 910 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 CT009754.4-201ENSMUST00000221430 565 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpa1Q8VEE4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Mir449b-201ENSMUST00000104833 80 ntBASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Gm6415-201ENSMUST00000118488 348 ntBASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Gm27622-201ENSMUST00000183779 60 ntBASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Daam2-202ENSMUST00000224595 1926 ntBASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rpa1Q8VEE4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rpa1Q8VEE4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms