Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx39aQ8VDW0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx39aQ8VDW0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Gm11222-201ENSMUST00000119005 738 ntBASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Gm26956-201ENSMUST00000182176 986 ntBASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx39aQ8VDW0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx39aQ8VDW0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms