Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gm44608-201ENSMUST00000206827 855 ntBASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Gm43514-201ENSMUST00000198852 424 ntBASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc9Q8VC31 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Gm15467-201ENSMUST00000120582 445 ntBASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Gm12260-201ENSMUST00000122447 411 ntBASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Mir3113-201ENSMUST00000175478 76 ntBASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Mir7221-201ENSMUST00000184009 72 ntBASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ccdc9Q8VC31 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms