Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd3Q8R1N4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nudcd3Q8R1N4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nudcd3Q8R1N4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nudcd3Q8R1N4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Gm6447-201ENSMUST00000118905 835 ntBASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Gm43514-201ENSMUST00000198852 424 ntBASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Gm9063-201ENSMUST00000223299 582 ntBASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd3Q8R1N4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Gm26464-201ENSMUST00000157094 305 ntBASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nudcd3Q8R1N4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 606 ms