Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm5879-201ENSMUST00000089501 1209 ntBASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx54Q8K4L0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ddx54Q8K4L0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Gm11892-201ENSMUST00000117711 1202 ntBASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Gm12291-201ENSMUST00000121627 311 ntBASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Gm5733-201ENSMUST00000190232 939 ntBASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Gm42790-201ENSMUST00000201268 969 ntBASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Mir339-201ENSMUST00000083659 96 ntBASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Ddx54Q8K4L0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms