Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.2□□□□□ -0.3
CopaQ8CIE6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CopaQ8CIE6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Gm27514-201ENSMUST00000183692 110 ntBASIC13.19□□□□□ -0.3
CopaQ8CIE6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CopaQ8CIE6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CopaQ8CIE6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Gm5187-201ENSMUST00000117317 991 ntBASIC13.18□□□□□ -0.3
CopaQ8CIE6 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.18□□□□□ -0.3
CopaQ8CIE6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.18□□□□□ -0.3
CopaQ8CIE6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.18□□□□□ -0.3
CopaQ8CIE6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CopaQ8CIE6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.17□□□□□ -0.3
CopaQ8CIE6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopaQ8CIE6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.17□□□□□ -0.3
CopaQ8CIE6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms