Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ShfQ8CG80 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ShfQ8CG80 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ShfQ8CG80 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ShfQ8CG80 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ShfQ8CG80 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ShfQ8CG80 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.49□□□□□ -0.57
ShfQ8CG80 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm14921-201ENSMUST00000118643 908 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.49□□□□□ -0.57
ShfQ8CG80 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.49□□□□□ -0.57
ShfQ8CG80 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.49□□□□□ -0.57
ShfQ8CG80 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.49□□□□□ -0.57
ShfQ8CG80 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.49□□□□□ -0.57
ShfQ8CG80 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.49□□□□□ -0.57
ShfQ8CG80 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ShfQ8CG80 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.48□□□□□ -0.57
ShfQ8CG80 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.48□□□□□ -0.57
ShfQ8CG80 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ShfQ8CG80 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ShfQ8CG80 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms