Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Gm13223-201ENSMUST00000118609 747 ntBASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Gm13813-201ENSMUST00000120998 787 ntBASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Gm9522-201ENSMUST00000182394 926 ntBASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lysmd4Q8CC84 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Gm9630-201ENSMUST00000178304 885 ntBASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Gm27390-201ENSMUST00000184516 176 ntBASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lysmd4Q8CC84 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms