Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim9Q8C7M3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Gm8099-201ENSMUST00000200510 742 ntBASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Gm32025-201ENSMUST00000217960 307 ntBASIC14.21□□□□□ -0.13
Trim9Q8C7M3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim9Q8C7M3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim9Q8C7M3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim9Q8C7M3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.21□□□□□ -0.14
Trim9Q8C7M3 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.21□□□□□ -0.14
Trim9Q8C7M3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim9Q8C7M3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Trim9Q8C7M3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.2□□□□□ -0.14
Trim9Q8C7M3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Gm23363-201ENSMUST00000175024 79 ntBASIC14.2□□□□□ -0.14
Trim9Q8C7M3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Gm19163-201ENSMUST00000223313 780 ntBASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.2□□□□□ -0.14
Trim9Q8C7M3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim9Q8C7M3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Gm16177-201ENSMUST00000120728 718 ntBASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim9Q8C7M3 Gm4768-201ENSMUST00000206199 686 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms