Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ska3Q8C263 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ska3Q8C263 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska3Q8C263 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.15□□□□□ -0.46
Ska3Q8C263 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.15□□□□□ -0.46
Ska3Q8C263 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.15□□□□□ -0.46
Ska3Q8C263 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.15□□□□□ -0.46
Ska3Q8C263 Gm43818-201ENSMUST00000200605 466 ntBASIC12.15□□□□□ -0.46
Ska3Q8C263 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Gm5186-201ENSMUST00000218781 920 ntBASIC12.15□□□□□ -0.46
Ska3Q8C263 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Gm10146-201ENSMUST00000072739 309 ntBASIC12.15□□□□□ -0.46
Ska3Q8C263 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.15□□□□□ -0.46
Ska3Q8C263 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ska3Q8C263 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska3Q8C263 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ska3Q8C263 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Mir686-201ENSMUST00000102174 109 ntBASIC12.14□□□□□ -0.47
Ska3Q8C263 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.14□□□□□ -0.47
Ska3Q8C263 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.14□□□□□ -0.47
Ska3Q8C263 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Ska3Q8C263 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.14□□□□□ -0.47
Ska3Q8C263 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.14□□□□□ -0.47
Ska3Q8C263 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska3Q8C263 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.13□□□□□ -0.47
Ska3Q8C263 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska3Q8C263 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska3Q8C263 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ska3Q8C263 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska3Q8C263 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska3Q8C263 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms