Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trerf1Q8BXJ2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Gm37368-201ENSMUST00000193173 3212 ntBASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Gm8463-201ENSMUST00000208573 613 ntBASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Gm5035-201ENSMUST00000215581 927 ntBASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trerf1Q8BXJ2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Matn2-203ENSMUST00000226766 3252 ntBASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Gm5356-201ENSMUST00000093326 615 ntBASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trerf1Q8BXJ2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trerf1Q8BXJ2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trerf1Q8BXJ2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trerf1Q8BXJ2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms