Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm38092-201ENSMUST00000195600 653 ntBASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Gm43133-201ENSMUST00000197472 463 ntBASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup54Q8BTS4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm8738-201ENSMUST00000172606 329 ntBASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm43438-201ENSMUST00000198133 379 ntBASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm5781-201ENSMUST00000219792 443 ntBASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup54Q8BTS4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Gm24548-201ENSMUST00000158650 108 ntBASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Gm43118-201ENSMUST00000199149 775 ntBASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup54Q8BTS4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms