Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rd3Q8BRE0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gm23363-201ENSMUST00000175024 79 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Mir7070-201ENSMUST00000183657 86 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gm8099-201ENSMUST00000200510 742 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gm44967-201ENSMUST00000207047 631 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rd3Q8BRE0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Daam2-202ENSMUST00000224595 1926 ntBASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gm19931-201ENSMUST00000198920 368 ntBASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gm5950-201ENSMUST00000213337 772 ntBASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.65□□□□□ -0.22
Rd3Q8BRE0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rd3Q8BRE0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rd3Q8BRE0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.65□□□□□ -0.23
Rd3Q8BRE0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.65□□□□□ -0.23
Rd3Q8BRE0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rd3Q8BRE0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms