Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gm24420-201ENSMUST00000176676 59 ntBASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gm4804-201ENSMUST00000182234 999 ntBASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Mir7221-201ENSMUST00000184009 72 ntBASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gm27494-201ENSMUST00000184735 189 ntBASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smco3Q8BQM7 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Gm8410-201ENSMUST00000117225 605 ntBASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Gm43125-201ENSMUST00000201724 730 ntBASIC10.6□□□□□ -0.71
Smco3Q8BQM7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smco3Q8BQM7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Gm6912-201ENSMUST00000117218 544 ntBASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Mir1895-201ENSMUST00000122615 79 ntBASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.59□□□□□ -0.71
Smco3Q8BQM7 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smco3Q8BQM7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms