Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Gm38223-201ENSMUST00000194484 695 ntBASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2bQ8BJF9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Gm44872-201ENSMUST00000207864 420 ntBASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2bQ8BJF9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2bQ8BJF9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2bQ8BJF9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2bQ8BJF9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2bQ8BJF9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2bQ8BJF9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms