Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vrk1Q80X41 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vrk1Q80X41 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vrk1Q80X41 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.34□□□□□ -0.43
Vrk1Q80X41 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vrk1Q80X41 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vrk1Q80X41 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.34□□□□□ -0.43
Vrk1Q80X41 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vrk1Q80X41 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Vrk1Q80X41 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vrk1Q80X41 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vrk1Q80X41 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vrk1Q80X41 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vrk1Q80X41 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.33□□□□□ -0.44
Vrk1Q80X41 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.33□□□□□ -0.44
Vrk1Q80X41 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gm14726-201ENSMUST00000120623 896 ntBASIC12.33□□□□□ -0.44
Vrk1Q80X41 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gm2383-201ENSMUST00000181461 807 ntBASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.33□□□□□ -0.44
Vrk1Q80X41 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vrk1Q80X41 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Gm22121-201ENSMUST00000175148 54 ntBASIC12.32□□□□□ -0.44
Vrk1Q80X41 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Gm30285-201ENSMUST00000214614 422 ntBASIC12.32□□□□□ -0.44
Vrk1Q80X41 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.32□□□□□ -0.44
Vrk1Q80X41 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.32□□□□□ -0.44
Vrk1Q80X41 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.32□□□□□ -0.44
Vrk1Q80X41 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vrk1Q80X41 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.32□□□□□ -0.44
Vrk1Q80X41 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vrk1Q80X41 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms