Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.89□□□□□ -0.35
Rpp38Q80UU2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rpp38Q80UU2 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.88□□□□□ -0.35
Rpp38Q80UU2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpp38Q80UU2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm40466-201ENSMUST00000212174 422 ntBASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpp38Q80UU2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.86□□□□□ -0.35
Rpp38Q80UU2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms