Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prpf38bQ80SY5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Gm2260-201ENSMUST00000184965 657 ntBASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Prpf38bQ80SY5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Gm7857-201ENSMUST00000117957 358 ntBASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf38bQ80SY5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms