Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.2□□□□□ -0.3
Slc6a4Q60857 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a4Q60857 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Daam2-202ENSMUST00000224595 1926 ntBASIC13.19□□□□□ -0.3
Slc6a4Q60857 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.19□□□□□ -0.3
Slc6a4Q60857 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Gm44364-201ENSMUST00000198368 141 ntBASIC13.19□□□□□ -0.3
Slc6a4Q60857 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.19□□□□□ -0.3
Slc6a4Q60857 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a4Q60857 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.18□□□□□ -0.3
Slc6a4Q60857 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.18□□□□□ -0.3
Slc6a4Q60857 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Gm22058-201ENSMUST00000083393 310 ntBASIC13.18□□□□□ -0.3
Slc6a4Q60857 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a4Q60857 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.17□□□□□ -0.3
Slc6a4Q60857 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a4Q60857 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms