Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Gm21769-201ENSMUST00000211922 111 ntBASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rc3h1Q4VGL6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Gm10434-201ENSMUST00000101158 471 ntBASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Gm11964-201ENSMUST00000120982 444 ntBASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Gm17376-201ENSMUST00000166016 84 ntBASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Gm4857-201ENSMUST00000192718 785 ntBASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rc3h1Q4VGL6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gm11531-201ENSMUST00000117614 555 ntBASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gm16296-201ENSMUST00000159905 325 ntBASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rc3h1Q4VGL6 Gm20614-201ENSMUST00000177106 632 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms