Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Gm7851-201ENSMUST00000117574 323 ntBASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Gm43916-201ENSMUST00000205062 967 ntBASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 AC153954.1-201ENSMUST00000216959 255 ntBASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 CT025551.1-201ENSMUST00000223996 692 ntBASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Arhgef40Q3UPH7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 AC166992.1-201ENSMUST00000216356 565 ntBASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 CT009713.8-201ENSMUST00000225448 560 ntBASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm6210-201ENSMUST00000204734 1942 ntBASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Gm5385-201ENSMUST00000118988 1559 ntBASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef40Q3UPH7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Gm270-201ENSMUST00000223010 976 ntBASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Gm5455-201ENSMUST00000058710 715 ntBASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Gm42840-201ENSMUST00000200303 2251 ntBASIC18.6■□□□□ 0.57
Arhgef40Q3UPH7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 AC154305.4-201ENSMUST00000224520 614 ntBASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC18.59■□□□□ 0.57
Arhgef40Q3UPH7 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms