Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upf3aQ3ULJ3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upf3aQ3ULJ3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.56□□□□□ -0.24
Upf3aQ3ULJ3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upf3aQ3ULJ3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upf3aQ3ULJ3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upf3aQ3ULJ3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gm16296-201ENSMUST00000159905 325 ntBASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gm8018-201ENSMUST00000173536 789 ntBASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gm25700-201ENSMUST00000177693 110 ntBASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gm44262-201ENSMUST00000204969 372 ntBASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Upf3aQ3ULJ3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.54□□□□□ -0.24
Upf3aQ3ULJ3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Mir6927-201ENSMUST00000184494 71 ntBASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Gm37986-201ENSMUST00000193285 383 ntBASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.53□□□□□ -0.24
Upf3aQ3ULJ3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms