Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Brf2Q3UAW9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.16□□□□□ -0.46
Brf2Q3UAW9 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Brf2Q3UAW9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.15□□□□□ -0.46
Brf2Q3UAW9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Brf2Q3UAW9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Brf2Q3UAW9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.15□□□□□ -0.47
Brf2Q3UAW9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Brf2Q3UAW9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Brf2Q3UAW9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms