Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Q3KNL4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.68□□□□□ -0.38
Q3KNL4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Q3KNL4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.68□□□□□ -0.38
Q3KNL4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3KNL4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.68□□□□□ -0.38
Q3KNL4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.67□□□□□ -0.38
Q3KNL4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 Gm12341-201ENSMUST00000119724 503 ntBASIC12.67□□□□□ -0.38
Q3KNL4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Gm28631-201ENSMUST00000190740 334 ntBASIC12.67□□□□□ -0.38
Q3KNL4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.67□□□□□ -0.38
Q3KNL4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Q3KNL4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.67□□□□□ -0.38
Q3KNL4 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.67□□□□□ -0.38
Q3KNL4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Q3KNL4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.66□□□□□ -0.38
Q3KNL4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Q3KNL4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Q3KNL4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.66□□□□□ -0.38
Q3KNL4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Q3KNL4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Q3KNL4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.66□□□□□ -0.38
Q3KNL4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.66□□□□□ -0.38
Q3KNL4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Q3KNL4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.66□□□□□ -0.38
Q3KNL4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.66□□□□□ -0.38
Q3KNL4 Gm6983-201ENSMUST00000214912 628 ntBASIC12.66□□□□□ -0.38
Q3KNL4 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.66□□□□□ -0.38
Q3KNL4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.66□□□□□ -0.38
Q3KNL4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Q3KNL4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.66□□□□□ -0.38
Q3KNL4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.66□□□□□ -0.38
Q3KNL4 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Q3KNL4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.66□□□□□ -0.38
Q3KNL4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.66□□□□□ -0.38
Q3KNL4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.66□□□□□ -0.38
Q3KNL4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q3KNL4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms