Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.56□□□□□ -0.56
Pkd1l3Q2EG98 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pkd1l3Q2EG98 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pkd1l3Q2EG98 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pkd1l3Q2EG98 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pkd1l3Q2EG98 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pkd1l3Q2EG98 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pkd1l3Q2EG98 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm20482-202ENSMUST00000174729 825 ntBASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm18827-201ENSMUST00000188341 790 ntBASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm19931-201ENSMUST00000198920 368 ntBASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm21769-201ENSMUST00000211922 111 ntBASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pkd1l3Q2EG98 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pkd1l3Q2EG98 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms