Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.46□□□□□ -0.58
Chd8Q09XV5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.45□□□□□ -0.58
Chd8Q09XV5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.45□□□□□ -0.58
Chd8Q09XV5 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.45□□□□□ -0.58
Chd8Q09XV5 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.45□□□□□ -0.58
Chd8Q09XV5 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.45□□□□□ -0.58
Chd8Q09XV5 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.45□□□□□ -0.58
Chd8Q09XV5 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd8Q09XV5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.44□□□□□ -0.58
Chd8Q09XV5 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.44□□□□□ -0.58
Chd8Q09XV5 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm5650-201ENSMUST00000209641 598 ntBASIC11.44□□□□□ -0.58
Chd8Q09XV5 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.44□□□□□ -0.58
Chd8Q09XV5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms