Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.99□□□□□ -0.33
Pfdn6Q03958 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.99□□□□□ -0.33
Pfdn6Q03958 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.99□□□□□ -0.33
Pfdn6Q03958 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pfdn6Q03958 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.98□□□□□ -0.33
Pfdn6Q03958 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm14350-201ENSMUST00000116642 640 ntBASIC12.98□□□□□ -0.33
Pfdn6Q03958 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm2495-201ENSMUST00000191160 466 ntBASIC12.98□□□□□ -0.33
Pfdn6Q03958 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gm17794-201ENSMUST00000220252 955 ntBASIC12.98□□□□□ -0.33
Pfdn6Q03958 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pfdn6Q03958 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.97□□□□□ -0.33
Pfdn6Q03958 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Gm23984-201ENSMUST00000157139 203 ntBASIC12.97□□□□□ -0.33
Pfdn6Q03958 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.97□□□□□ -0.33
Pfdn6Q03958 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.97□□□□□ -0.33
Pfdn6Q03958 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.97□□□□□ -0.33
Pfdn6Q03958 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.97□□□□□ -0.33
Pfdn6Q03958 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms