Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Msx2Q03358 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Msx2Q03358 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Msx2Q03358 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Msx2Q03358 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Rubie-203ENSMUST00000227803 2430 ntBASIC12.51□□□□□ -0.41
Msx2Q03358 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.51□□□□□ -0.41
Msx2Q03358 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Msx2Q03358 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.51□□□□□ -0.41
Msx2Q03358 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.51□□□□□ -0.41
Msx2Q03358 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.51□□□□□ -0.41
Msx2Q03358 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.51□□□□□ -0.41
Msx2Q03358 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.51□□□□□ -0.41
Msx2Q03358 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.51□□□□□ -0.41
Msx2Q03358 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.51□□□□□ -0.41
Msx2Q03358 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Msx2Q03358 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.51□□□□□ -0.41
Msx2Q03358 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Msx2Q03358 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Msx2Q03358 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.5□□□□□ -0.41
Msx2Q03358 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.5□□□□□ -0.41
Msx2Q03358 Gm4875-201ENSMUST00000118257 786 ntBASIC12.5□□□□□ -0.41
Msx2Q03358 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.5□□□□□ -0.41
Msx2Q03358 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.5□□□□□ -0.41
Msx2Q03358 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.5□□□□□ -0.41
Msx2Q03358 Gm27397-201ENSMUST00000184997 107 ntBASIC12.5□□□□□ -0.41
Msx2Q03358 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.5□□□□□ -0.41
Msx2Q03358 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Msx2Q03358 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Msx2Q03358 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Msx2Q03358 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Msx2Q03358 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.49□□□□□ -0.41
Msx2Q03358 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Msx2Q03358 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Msx2Q03358 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Msx2Q03358 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Msx2Q03358 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.49□□□□□ -0.41
Msx2Q03358 Gm12485-201ENSMUST00000119641 291 ntBASIC12.49□□□□□ -0.41
Msx2Q03358 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Msx2Q03358 Gm17837-201ENSMUST00000186435 985 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms