Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm14723-201ENSMUST00000118686 215 ntBASIC12.88□□□□□ -0.35
Col6a2Q02788 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.88□□□□□ -0.35
Col6a2Q02788 Gm38266-201ENSMUST00000194931 421 ntBASIC12.88□□□□□ -0.35
Col6a2Q02788 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Gm6334-201ENSMUST00000207083 228 ntBASIC12.88□□□□□ -0.35
Col6a2Q02788 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.88□□□□□ -0.35
Col6a2Q02788 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a2Q02788 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.88□□□□□ -0.35
Col6a2Q02788 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.88□□□□□ -0.35
Col6a2Q02788 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.88□□□□□ -0.35
Col6a2Q02788 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Col6a2Q02788 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Col6a2Q02788 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a2Q02788 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.87□□□□□ -0.35
Col6a2Q02788 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Gm15370-201ENSMUST00000117158 253 ntBASIC12.87□□□□□ -0.35
Col6a2Q02788 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.87□□□□□ -0.35
Col6a2Q02788 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Gm43822-201ENSMUST00000200285 476 ntBASIC12.87□□□□□ -0.35
Col6a2Q02788 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Gm5781-201ENSMUST00000219792 443 ntBASIC12.87□□□□□ -0.35
Col6a2Q02788 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a2Q02788 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a2Q02788 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.86□□□□□ -0.35
Col6a2Q02788 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.86□□□□□ -0.35
Col6a2Q02788 Gm9368-201ENSMUST00000219348 831 ntBASIC12.86□□□□□ -0.35
Col6a2Q02788 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col6a2Q02788 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a2Q02788 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms