Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.79□□□□□ -0.52
Scn1bP97952 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.79□□□□□ -0.52
Scn1bP97952 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Scn1bP97952 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Scn1bP97952 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Scn1bP97952 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.78□□□□□ -0.52
Scn1bP97952 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.78□□□□□ -0.52
Scn1bP97952 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Gm8410-201ENSMUST00000117225 605 ntBASIC11.78□□□□□ -0.52
Scn1bP97952 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.78□□□□□ -0.52
Scn1bP97952 Gm9719-201ENSMUST00000162765 543 ntBASIC11.78□□□□□ -0.52
Scn1bP97952 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.78□□□□□ -0.52
Scn1bP97952 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.78□□□□□ -0.52
Scn1bP97952 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Scn1bP97952 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.78□□□□□ -0.52
Scn1bP97952 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn1bP97952 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Scn1bP97952 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn1bP97952 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Scn1bP97952 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn1bP97952 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.77□□□□□ -0.52
Scn1bP97952 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.77□□□□□ -0.52
Scn1bP97952 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Scn1bP97952 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.77□□□□□ -0.52
Scn1bP97952 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.77□□□□□ -0.52
Scn1bP97952 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn1bP97952 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Scn1bP97952 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn1bP97952 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Scn1bP97952 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Scn1bP97952 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn1bP97952 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Scn1bP97952 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scn1bP97952 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Scn1bP97952 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Gm25287-201ENSMUST00000103846 110 ntBASIC11.77□□□□□ -0.53
Scn1bP97952 Gm22918-201ENSMUST00000103855 110 ntBASIC11.77□□□□□ -0.53
Scn1bP97952 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Scn1bP97952 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Scn1bP97952 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.77□□□□□ -0.53
Scn1bP97952 Gm5566-201ENSMUST00000116118 459 ntBASIC11.77□□□□□ -0.53
Scn1bP97952 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.77□□□□□ -0.53
Scn1bP97952 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Gm7774-201ENSMUST00000200064 533 ntBASIC11.77□□□□□ -0.53
Scn1bP97952 Gm5779-201ENSMUST00000218467 910 ntBASIC11.77□□□□□ -0.53
Scn1bP97952 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Scn1bP97952 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.77□□□□□ -0.53
Scn1bP97952 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn1bP97952 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms