Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thumpd3P97770 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Thumpd3P97770 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Thumpd3P97770 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Thumpd3P97770 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Thumpd3P97770 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.14□□□□□ -0.31
Thumpd3P97770 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Thumpd3P97770 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.14□□□□□ -0.31
Thumpd3P97770 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Thumpd3P97770 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.14□□□□□ -0.31
Thumpd3P97770 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.14□□□□□ -0.31
Thumpd3P97770 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.14□□□□□ -0.31
Thumpd3P97770 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.14□□□□□ -0.31
Thumpd3P97770 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.14□□□□□ -0.31
Thumpd3P97770 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Thumpd3P97770 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Thumpd3P97770 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Thumpd3P97770 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Thumpd3P97770 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd3P97770 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm13829-201ENSMUST00000119600 138 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm12403-201ENSMUST00000121384 959 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm18062-201ENSMUST00000208020 547 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm18055-201ENSMUST00000208254 547 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Thumpd3P97770 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.13□□□□□ -0.31
Thumpd3P97770 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.13□□□□□ -0.31
Thumpd3P97770 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd3P97770 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd3P97770 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms