Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cxcr4P70658 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cxcr4P70658 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcr4P70658 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcr4P70658 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcr4P70658 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcr4P70658 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcr4P70658 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcr4P70658 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcr4P70658 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcr4P70658 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.11□□□□□ -0.47
Cxcr4P70658 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.11□□□□□ -0.47
Cxcr4P70658 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.11□□□□□ -0.47
Cxcr4P70658 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.11□□□□□ -0.47
Cxcr4P70658 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Gm27486-201ENSMUST00000184923 80 ntBASIC12.11□□□□□ -0.47
Cxcr4P70658 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Cxcr4P70658 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.11□□□□□ -0.47
Cxcr4P70658 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcr4P70658 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.11□□□□□ -0.47
Cxcr4P70658 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cxcr4P70658 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcr4P70658 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cxcr4P70658 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Cxcr4P70658 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.1□□□□□ -0.47
Cxcr4P70658 Gm29608-201ENSMUST00000190444 463 ntBASIC12.1□□□□□ -0.47
Cxcr4P70658 Gm7287-201ENSMUST00000205267 602 ntBASIC12.1□□□□□ -0.47
Cxcr4P70658 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cxcr4P70658 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.1□□□□□ -0.47
Cxcr4P70658 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.1□□□□□ -0.47
Cxcr4P70658 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cxcr4P70658 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.1□□□□□ -0.47
Cxcr4P70658 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.1□□□□□ -0.47
Cxcr4P70658 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.1□□□□□ -0.47
Cxcr4P70658 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcr4P70658 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.1□□□□□ -0.47
Cxcr4P70658 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcr4P70658 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcr4P70658 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcr4P70658 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcr4P70658 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcr4P70658 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcr4P70658 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cxcr4P70658 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms