Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Paupar-201ENSMUST00000194826 3482 ntBASIC10.78□□□□□ -0.68
Pdlim4P70271 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.78□□□□□ -0.68
Pdlim4P70271 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pdlim4P70271 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pdlim4P70271 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Pdlim4P70271 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pdlim4P70271 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.77□□□□□ -0.69
Pdlim4P70271 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.77□□□□□ -0.69
Pdlim4P70271 Gm15824-201ENSMUST00000119516 955 ntBASIC10.77□□□□□ -0.69
Pdlim4P70271 Gm8810-201ENSMUST00000172895 754 ntBASIC10.77□□□□□ -0.69
Pdlim4P70271 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.77□□□□□ -0.69
Pdlim4P70271 Gm44069-201ENSMUST00000204898 506 ntBASIC10.77□□□□□ -0.69
Pdlim4P70271 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pdlim4P70271 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pdlim4P70271 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm11618-201ENSMUST00000117946 267 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm11803-201ENSMUST00000119966 444 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Proscos-202ENSMUST00000178990 666 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm29649-201ENSMUST00000185649 419 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm19931-201ENSMUST00000198920 368 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm8598-201ENSMUST00000221184 836 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.76□□□□□ -0.69
Pdlim4P70271 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms