Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.22□□□□□ -0.13
Hmgb1P63158 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgb1P63158 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb1P63158 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.21□□□□□ -0.13
Hmgb1P63158 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.21□□□□□ -0.13
Hmgb1P63158 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.21□□□□□ -0.13
Hmgb1P63158 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Hmgb1P63158 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.21□□□□□ -0.13
Hmgb1P63158 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.21□□□□□ -0.13
Hmgb1P63158 Gm45668-201ENSMUST00000211271 493 ntBASIC14.21□□□□□ -0.13
Hmgb1P63158 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmgb1P63158 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.21□□□□□ -0.13
Hmgb1P63158 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmgb1P63158 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC14.21□□□□□ -0.13
Hmgb1P63158 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb1P63158 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hmgb1P63158 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgb1P63158 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
Hmgb1P63158 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Hmgb1P63158 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgb1P63158 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.21□□□□□ -0.14
Hmgb1P63158 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgb1P63158 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Hmgb1P63158 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgb1P63158 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hmgb1P63158 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hmgb1P63158 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb1P63158 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.19□□□□□ -0.14
Hmgb1P63158 Gm12928-201ENSMUST00000117115 573 ntBASIC14.19□□□□□ -0.14
Hmgb1P63158 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.19□□□□□ -0.14
Hmgb1P63158 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.19□□□□□ -0.14
Hmgb1P63158 Gm2495-201ENSMUST00000191160 466 ntBASIC14.19□□□□□ -0.14
Hmgb1P63158 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.19□□□□□ -0.14
Hmgb1P63158 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.19□□□□□ -0.14
Hmgb1P63158 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.19□□□□□ -0.14
Hmgb1P63158 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.19□□□□□ -0.14
Hmgb1P63158 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Hmgb1P63158 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hmgb1P63158 Gm2423-201ENSMUST00000074863 733 ntBASIC14.19□□□□□ -0.14
Hmgb1P63158 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgb1P63158 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms