Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.2□□□□□ -0.3
Ybx1P62960 Gm11439-201ENSMUST00000118598 409 ntBASIC13.2□□□□□ -0.3
Ybx1P62960 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.2□□□□□ -0.3
Ybx1P62960 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.2□□□□□ -0.3
Ybx1P62960 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.2□□□□□ -0.3
Ybx1P62960 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.2□□□□□ -0.3
Ybx1P62960 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.2□□□□□ -0.3
Ybx1P62960 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.2□□□□□ -0.3
Ybx1P62960 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.2□□□□□ -0.3
Ybx1P62960 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.2□□□□□ -0.3
Ybx1P62960 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ybx1P62960 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.2□□□□□ -0.3
Ybx1P62960 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ybx1P62960 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.19□□□□□ -0.3
Ybx1P62960 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.19□□□□□ -0.3
Ybx1P62960 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ybx1P62960 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.19□□□□□ -0.3
Ybx1P62960 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Ybx1P62960 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.19□□□□□ -0.3
Ybx1P62960 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm15276-201ENSMUST00000145953 498 ntBASIC13.19□□□□□ -0.3
Ybx1P62960 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ybx1P62960 Mir6979-201ENSMUST00000183927 56 ntBASIC13.19□□□□□ -0.3
Ybx1P62960 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.19□□□□□ -0.3
Ybx1P62960 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.19□□□□□ -0.3
Ybx1P62960 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.19□□□□□ -0.3
Ybx1P62960 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.19□□□□□ -0.3
Ybx1P62960 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ybx1P62960 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ybx1P62960 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
Ybx1P62960 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Gm14028-201ENSMUST00000117434 479 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 Gm14208-201ENSMUST00000119645 678 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Mir5120-201ENSMUST00000175020 78 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 Gm8099-201ENSMUST00000200510 742 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.18□□□□□ -0.3
Ybx1P62960 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.18□□□□□ -0.3
Ybx1P62960 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Ybx1P62960 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ybx1P62960 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms