Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.34□□□□□ -0.59
Lsm6P62313 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm6P62313 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm6P62313 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.33□□□□□ -0.59
Lsm6P62313 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lsm6P62313 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lsm6P62313 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.59
Lsm6P62313 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Lsm6P62313 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lsm6P62313 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.33□□□□□ -0.6
Lsm6P62313 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lsm6P62313 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.33□□□□□ -0.6
Lsm6P62313 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.33□□□□□ -0.6
Lsm6P62313 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Gm13813-201ENSMUST00000120998 787 ntBASIC11.33□□□□□ -0.6
Lsm6P62313 Gm13123-201ENSMUST00000122173 492 ntBASIC11.33□□□□□ -0.6
Lsm6P62313 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.33□□□□□ -0.6
Lsm6P62313 Gm24196-201ENSMUST00000179161 110 ntBASIC11.33□□□□□ -0.6
Lsm6P62313 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.33□□□□□ -0.6
Lsm6P62313 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lsm6P62313 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lsm6P62313 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.33□□□□□ -0.6
Lsm6P62313 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm6P62313 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lsm6P62313 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Lsm6P62313 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Lsm6P62313 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm6P62313 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm6P62313 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms