Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrch1P62046 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Lrch1P62046 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.15■□□□□ 0.02
Lrch1P62046 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.15■□□□□ 0.02
Lrch1P62046 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Gm17391-201ENSMUST00000171036 126 ntBASIC15.15■□□□□ 0.02
Lrch1P62046 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.15■□□□□ 0.02
Lrch1P62046 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.15■□□□□ 0.02
Lrch1P62046 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.15■□□□□ 0.02
Lrch1P62046 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.15■□□□□ 0.02
Lrch1P62046 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lrch1P62046 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.15■□□□□ 0.02
Lrch1P62046 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrch1P62046 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Lrch1P62046 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.14■□□□□ 0.01
Lrch1P62046 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Lrch1P62046 Gm13035-201ENSMUST00000117496 342 ntBASIC15.14■□□□□ 0.01
Lrch1P62046 Gm11941-201ENSMUST00000119904 610 ntBASIC15.14■□□□□ 0.01
Lrch1P62046 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.14■□□□□ 0.01
Lrch1P62046 Gm16397-201ENSMUST00000122201 494 ntBASIC15.14■□□□□ 0.01
Lrch1P62046 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Gm10051-201ENSMUST00000145209 414 ntBASIC15.14■□□□□ 0.01
Lrch1P62046 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.14■□□□□ 0.01
Lrch1P62046 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.14■□□□□ 0.01
Lrch1P62046 Gm16296-201ENSMUST00000159905 325 ntBASIC15.14■□□□□ 0.01
Lrch1P62046 Gm6407-201ENSMUST00000176468 549 ntBASIC15.14■□□□□ 0.01
Lrch1P62046 Gm8365-201ENSMUST00000197334 648 ntBASIC15.14■□□□□ 0.01
Lrch1P62046 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lrch1P62046 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Lrch1P62046 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.14■□□□□ 0.01
Lrch1P62046 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.14■□□□□ 0.01
Lrch1P62046 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lrch1P62046 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lrch1P62046 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Lrch1P62046 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lrch1P62046 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrch1P62046 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Lrch1P62046 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.13■□□□□ 0.01
Lrch1P62046 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Lrch1P62046 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.13■□□□□ 0.01
Lrch1P62046 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.13■□□□□ 0.01
Lrch1P62046 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.13■□□□□ 0.01
Lrch1P62046 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.13■□□□□ 0.01
Lrch1P62046 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Gm28071-201ENSMUST00000190355 478 ntBASIC15.13■□□□□ 0.01
Lrch1P62046 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lrch1P62046 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.13■□□□□ 0.01
Lrch1P62046 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms