Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a1P61620 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a1P61620 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Gm15678-201ENSMUST00000117573 960 ntBASIC11.39□□□□□ -0.59
Sec61a1P61620 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.39□□□□□ -0.59
Sec61a1P61620 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.39□□□□□ -0.59
Sec61a1P61620 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.39□□□□□ -0.59
Sec61a1P61620 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sec61a1P61620 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a1P61620 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.38□□□□□ -0.59
Sec61a1P61620 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.38□□□□□ -0.59
Sec61a1P61620 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.38□□□□□ -0.59
Sec61a1P61620 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.38□□□□□ -0.59
Sec61a1P61620 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Sec61a1P61620 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.38□□□□□ -0.59
Sec61a1P61620 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sec61a1P61620 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Gm11918-201ENSMUST00000121660 179 ntBASIC11.38□□□□□ -0.59
Sec61a1P61620 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.38□□□□□ -0.59
Sec61a1P61620 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.38□□□□□ -0.59
Sec61a1P61620 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.38□□□□□ -0.59
Sec61a1P61620 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.38□□□□□ -0.59
Sec61a1P61620 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.38□□□□□ -0.59
Sec61a1P61620 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a1P61620 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.37□□□□□ -0.59
Sec61a1P61620 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.37□□□□□ -0.59
Sec61a1P61620 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.37□□□□□ -0.59
Sec61a1P61620 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.37□□□□□ -0.59
Sec61a1P61620 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.37□□□□□ -0.59
Sec61a1P61620 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61a1P61620 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms