Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.23□□□□□ -0.93
Cks1bP61025 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.23□□□□□ -0.93
Cks1bP61025 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cks1bP61025 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.23□□□□□ -0.93
Cks1bP61025 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1bP61025 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1bP61025 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cks1bP61025 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.23□□□□□ -0.93
Cks1bP61025 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1bP61025 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.23□□□□□ -0.93
Cks1bP61025 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1bP61025 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1bP61025 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cks1bP61025 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cks1bP61025 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.22□□□□□ -0.93
Cks1bP61025 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.22□□□□□ -0.93
Cks1bP61025 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.22□□□□□ -0.93
Cks1bP61025 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Gm12260-201ENSMUST00000122447 411 ntBASIC9.22□□□□□ -0.93
Cks1bP61025 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Cks1bP61025 Mir3113-201ENSMUST00000175478 76 ntBASIC9.22□□□□□ -0.93
Cks1bP61025 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC9.22□□□□□ -0.93
Cks1bP61025 Gm18057-201ENSMUST00000208220 503 ntBASIC9.22□□□□□ -0.93
Cks1bP61025 Mzt1-203ENSMUST00000227948 952 ntBASIC9.22□□□□□ -0.93
Cks1bP61025 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC9.22□□□□□ -0.93
Cks1bP61025 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cks1bP61025 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Cks1bP61025 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.22□□□□□ -0.93
Cks1bP61025 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.22□□□□□ -0.93
Cks1bP61025 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cks1bP61025 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.22□□□□□ -0.93
Cks1bP61025 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.22□□□□□ -0.93
Cks1bP61025 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1bP61025 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1bP61025 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1bP61025 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1bP61025 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1bP61025 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1bP61025 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1bP61025 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Cks1bP61025 Gm43423-201ENSMUST00000198390 2094 ntBASIC9.21□□□□□ -0.93
Cks1bP61025 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1bP61025 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC9.21□□□□□ -0.94
Cks1bP61025 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.21□□□□□ -0.94
Cks1bP61025 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.21□□□□□ -0.94
Cks1bP61025 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.21□□□□□ -0.94
Cks1bP61025 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Cks1bP61025 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cks1bP61025 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Cks1bP61025 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms