Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdkn2bP55271 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdkn2bP55271 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdkn2bP55271 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.34□□□□□ -0.43
Cdkn2bP55271 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdkn2bP55271 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.34□□□□□ -0.43
Cdkn2bP55271 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.34□□□□□ -0.43
Cdkn2bP55271 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdkn2bP55271 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cdkn2bP55271 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.34□□□□□ -0.43
Cdkn2bP55271 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.34□□□□□ -0.43
Cdkn2bP55271 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.34□□□□□ -0.43
Cdkn2bP55271 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdkn2bP55271 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdkn2bP55271 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdkn2bP55271 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Cdkn2bP55271 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Cdkn2bP55271 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.33□□□□□ -0.43
Cdkn2bP55271 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Gm18307-201ENSMUST00000206864 949 ntBASIC12.33□□□□□ -0.44
Cdkn2bP55271 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Gm26035-201ENSMUST00000083065 308 ntBASIC12.33□□□□□ -0.44
Cdkn2bP55271 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.33□□□□□ -0.44
Cdkn2bP55271 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cdkn2bP55271 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Cdkn2bP55271 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms