Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NrlP54846 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.74□□□□□ -0.21
NrlP54846 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.74□□□□□ -0.21
NrlP54846 Gm31256-201ENSMUST00000194705 506 ntBASIC13.74□□□□□ -0.21
NrlP54846 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.74□□□□□ -0.21
NrlP54846 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.74□□□□□ -0.21
NrlP54846 Gm22042-201ENSMUST00000082989 165 ntBASIC13.74□□□□□ -0.21
NrlP54846 Gm26232-201ENSMUST00000083360 166 ntBASIC13.74□□□□□ -0.21
NrlP54846 Gm24136-201ENSMUST00000083374 165 ntBASIC13.74□□□□□ -0.21
NrlP54846 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.74□□□□□ -0.21
NrlP54846 Gm26110-201ENSMUST00000083971 165 ntBASIC13.74□□□□□ -0.21
NrlP54846 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
NrlP54846 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.74□□□□□ -0.21
NrlP54846 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.74□□□□□ -0.21
NrlP54846 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NrlP54846 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NrlP54846 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
NrlP54846 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NrlP54846 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NrlP54846 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NrlP54846 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.74□□□□□ -0.21
NrlP54846 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NrlP54846 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NrlP54846 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NrlP54846 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.74□□□□□ -0.21
NrlP54846 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NrlP54846 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NrlP54846 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
NrlP54846 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.73□□□□□ -0.21
NrlP54846 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NrlP54846 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.73□□□□□ -0.21
NrlP54846 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.73□□□□□ -0.21
NrlP54846 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NrlP54846 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.73□□□□□ -0.21
NrlP54846 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.73□□□□□ -0.21
NrlP54846 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NrlP54846 Gm16505-201ENSMUST00000179981 232 ntBASIC13.73□□□□□ -0.21
NrlP54846 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.73□□□□□ -0.21
NrlP54846 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.73□□□□□ -0.21
NrlP54846 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.73□□□□□ -0.21
NrlP54846 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.73□□□□□ -0.21
NrlP54846 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.73□□□□□ -0.21
NrlP54846 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
NrlP54846 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NrlP54846 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NrlP54846 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.72□□□□□ -0.21
NrlP54846 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NrlP54846 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NrlP54846 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.72□□□□□ -0.21
NrlP54846 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NrlP54846 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
NrlP54846 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.72□□□□□ -0.21
NrlP54846 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.72□□□□□ -0.21
NrlP54846 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.72□□□□□ -0.21
NrlP54846 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.72□□□□□ -0.21
NrlP54846 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NrlP54846 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.72□□□□□ -0.21
NrlP54846 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.72□□□□□ -0.21
NrlP54846 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms