Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm14017-201ENSMUST00000121934 386 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.1□□□□□ -0.31
Ddx6P54823 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.1□□□□□ -0.31
Ddx6P54823 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.1□□□□□ -0.31
Ddx6P54823 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Gm14130-201ENSMUST00000118417 987 ntBASIC13.09□□□□□ -0.31
Ddx6P54823 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.09□□□□□ -0.31
Ddx6P54823 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.09□□□□□ -0.31
Ddx6P54823 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Ddx6P54823 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Gm8885-201ENSMUST00000189382 598 ntBASIC13.09□□□□□ -0.31
Ddx6P54823 AA914427-201ENSMUST00000193194 1166 ntBASIC13.09□□□□□ -0.31
Ddx6P54823 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Gm18212-201ENSMUST00000211678 889 ntBASIC13.09□□□□□ -0.31
Ddx6P54823 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.09□□□□□ -0.31
Ddx6P54823 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.09□□□□□ -0.31
Ddx6P54823 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.09□□□□□ -0.31
Ddx6P54823 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Ddx6P54823 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Ddx6P54823 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ddx6P54823 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx6P54823 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.08□□□□□ -0.31
Ddx6P54823 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Ddx6P54823 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx6P54823 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx6P54823 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx6P54823 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ddx6P54823 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.08□□□□□ -0.32
Ddx6P54823 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ddx6P54823 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ddx6P54823 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.08□□□□□ -0.32
Ddx6P54823 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.08□□□□□ -0.32
Ddx6P54823 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ddx6P54823 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.08□□□□□ -0.32
Ddx6P54823 Gm44967-201ENSMUST00000207047 631 ntBASIC13.08□□□□□ -0.32
Ddx6P54823 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.08□□□□□ -0.32
Ddx6P54823 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx6P54823 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.08□□□□□ -0.32
Ddx6P54823 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.08□□□□□ -0.32
Ddx6P54823 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms