Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Gm26927-201ENSMUST00000182385 965 ntBASIC12.76□□□□□ -0.37
Pdx1P52946 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.76□□□□□ -0.37
Pdx1P52946 Gm27731-201ENSMUST00000185192 107 ntBASIC12.76□□□□□ -0.37
Pdx1P52946 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.76□□□□□ -0.37
Pdx1P52946 Gm19163-201ENSMUST00000223313 780 ntBASIC12.76□□□□□ -0.37
Pdx1P52946 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Pdx1P52946 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pdx1P52946 Gm13226-201ENSMUST00000117838 404 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 Gm14660-201ENSMUST00000119809 575 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.75□□□□□ -0.37
Pdx1P52946 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.75□□□□□ -0.37
Pdx1P52946 Gm22121-201ENSMUST00000175148 54 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Pdx1P52946 Gm32025-201ENSMUST00000217960 307 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.75□□□□□ -0.37
Pdx1P52946 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pdx1P52946 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.75□□□□□ -0.37
Pdx1P52946 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pdx1P52946 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Pdx1P52946 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdx1P52946 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdx1P52946 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdx1P52946 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Pdx1P52946 Gm12291-201ENSMUST00000121627 311 ntBASIC12.74□□□□□ -0.37
Pdx1P52946 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pdx1P52946 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdx1P52946 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pdx1P52946 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdx1P52946 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Pdx1P52946 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.74□□□□□ -0.37
Pdx1P52946 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdx1P52946 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Pdx1P52946 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdx1P52946 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Pdx1P52946 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pdx1P52946 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms